Transcript: lnc-PIGB-1:5

Basic information

LNCipedia transcript ID: lnc-PIGB-1:5 
LNCipedia gene ID: lnc-PIGB-1
Location (hg38): chr15:55090875-55095059
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1913 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc010bfv_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 24.9673 non-coding 
CPAT coding probability 4.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PIGB-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PIGB-1:5
4.0 lnc-PIGB-1:5
4.1 lnc-PIGB-1:5
5.0 lnc-PIGB-1:5
5.1 lnc-MAP2K1-150:5
5.2 lnc-PIGB-1:5