Transcript: lnc-PIGS-1:1

Basic information

LNCipedia transcript ID: lnc-PIGS-1:1 
LNCipedia gene ID: lnc-PIGS-1
Location (hg38): chr17:28551825-28552625
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 556 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT052582
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -58.9228 non-coding 
CPAT coding probability 81.06% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PIGS-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PIGS-1:1
4.0 lnc-PIGS-1:1
4.1 lnc-PIGS-1:1
5.0 lnc-PIGS-1:1
5.1 lnc-SLC6A4-82:1
5.2 lnc-PIGS-1:1