Transcript: lnc-PIK3AP1-6:3

Basic information

LNCipedia transcript ID: lnc-PIK3AP1-6:3 
LNCipedia gene ID: lnc-PIK3AP1-6
Location (hg38): chr10:96830563-96832226
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1664 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000000543.1|MICT00000046744.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -88.2981 non-coding 
CPAT coding probability 0.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PIK3AP1-6:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PIK3AP1-6:3
5.0 lnc-PIK3AP1-6:3
5.1 lnc-NOC3L-6:4
5.2 lnc-PIK3AP1-6:3