Transcript: lnc-PIK3AP1-6:4

Basic information

LNCipedia transcript ID: lnc-PIK3AP1-6:4 
LNCipedia gene ID: lnc-PIK3AP1-6
RefSeq ID: NR_135921
Location (hg38): chr10:96830632-96832458
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1827 bp
Exons: 1
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135921.1
Alternative gene names: LOC102723665


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -88.2981 non-coding 
CPAT coding probability 64.16% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PIK3AP1-6:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-NOC3L-6:2
5.1 lnc-NOC3L-6:2
5.2 lnc-PIK3AP1-6:4