Transcript: lnc-PIK3C3-16:1

Basic information

LNCipedia transcript ID: lnc-PIK3C3-16:1 
LNCipedia gene ID: lnc-PIK3C3-16
Location (hg38): chr18:39598267-39598508
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 242 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT059024; FPKM1_group_13873_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -41.2789 non-coding 
CPAT coding probability 0.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PIK3C3-16:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PIK3C3-16:1
4.0 lnc-PIK3C3-16:1
4.1 lnc-PIK3C3-16:1
5.0 lnc-PIK3C3-16:1
5.1 lnc-CTIF-85:1
5.2 lnc-PIK3C3-16:1