Transcript: lnc-PIP4K2A-1:1

Basic information

LNCipedia transcript ID: lnc-PIP4K2A-1:1 
LNCipedia gene ID: lnc-PIP4K2A-1
RefSeq ID: NR_036533
Location (hg38): chr10:22435425-22437929
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2505 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT011749; NR_036533; NR_036533.1
Alternative gene names: LOC100499489


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -61.4936 non-coding 
CPAT coding probability 25.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PIP4K2A-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PIP4K2A-1:1
4.0 lnc-PIP4K2A-1:1
4.1 lnc-PIP4K2A-1:1
5.0 lnc-PIP4K2A-1:1
5.1 lnc-MPP7-90:1
5.2 lnc-PIP4K2A-1:1