Transcript: lnc-PIWIL4-1:20

Basic information

LNCipedia transcript ID: lnc-PIWIL4-1:20 
LNCipedia gene ID: lnc-PIWIL4-1
Location (hg38): chr11:94647958-94651595
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 463 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT023738
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -70.2431 non-coding 
CPAT coding probability 11.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PIWIL4-1:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PIWIL4-2:5
4.0 lnc-PIWIL4-2:5
4.1 lnc-PIWIL4-1:20
5.0 lnc-PIWIL4-1:20
5.1 lnc-TRIM49C-39:20
5.2 lnc-PIWIL4-1:20