Transcript: lnc-PKHD1-6:1

Basic information

LNCipedia transcript ID: lnc-PKHD1-6:1 
LNCipedia gene ID: lnc-PKHD1-6
Location (hg38): chr6:50912712-50913256
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 545 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT113088
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 86.7647 coding 
CPAT coding probability 70.46% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PKHD1-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PKHD1-6:1
4.0 lnc-PKHD1-6:1
4.1 lnc-PKHD1-6:1
5.0 lnc-PKHD1-6:1
5.1 lnc-PGK2-11:1
5.2 lnc-PKHD1-6:1