Transcript: lnc-PKN3-1:7

Basic information

LNCipedia transcript ID: lnc-PKN3-1:7 
LNCipedia gene ID: lnc-PKN3-1
Location (hg38): chr9:128724445-128733194
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 544 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000223478.1|ENST00000443631.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -308.084 non-coding 
CPAT coding probability 13.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PKN3-1:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PKN3-1:7
5.0 lnc-PKN3-1:7
5.1 lnc-PTPA-22:4
5.2 lnc-PKN3-1:7