Transcript: lnc-PLA2G1B-2:1

Basic information

LNCipedia transcript ID: lnc-PLA2G1B-2:1 
LNCipedia gene ID: lnc-PLA2G1B-2
Location (hg38): chr12:120311384-120317575
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6192 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000013574.1|ENCT00000107967.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 43.2369 non-coding 
CPAT coding probability 5.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PLA2G1B-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PLA2G1B-2:1
5.0 lnc-PLA2G1B-2:1
5.1 lnc-MSI1-2:2
5.2 lnc-PLA2G1B-2:1