Transcript: lnc-PLAT-1:7

Basic information

LNCipedia transcript ID: lnc-PLAT-1:7 
LNCipedia gene ID: lnc-PLAT-1
Location (hg38): chr8:42140740-42141237
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 365 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014990; NONHSAT126263
Alternative gene names: XLOC_007069; linc-MYST3-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -302.4552 non-coding 
CPAT coding probability 9.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLAT-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PLAT-1:1
3.1 lnc-PLAT-2:1
4.0 lnc-PLAT-2:1
4.1 lnc-PLAT-1:7
5.0 lnc-PLAT-1:7
5.1 lnc-SFRP1-16:7
5.2 lnc-PLAT-1:7