Transcript: lnc-PLCD3-1:17

Basic information

LNCipedia transcript ID: lnc-PLCD3-1:17 
LNCipedia gene ID: lnc-PLCD3-1
Location (hg38): chr17:45145534-45147316
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1783 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT054018
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -90.9182 non-coding 
CPAT coding probability 8.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLCD3-1:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PLCD3-2:2
4.0 lnc-PLCD3-2:2
4.1 lnc-PLCD3-1:17
5.0 lnc-PLCD3-1:17
5.1 lnc-GFAP-16:5
5.2 lnc-PLCD3-1:17