Transcript: lnc-PLCD3-4:1

Basic information

LNCipedia transcript ID: lnc-PLCD3-4:1 
LNCipedia gene ID: lnc-PLCD3-4
Location (hg38): chr17:45159143-45161538
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 428 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224505.2|FTMT26500040286.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -197.3285 non-coding 
CPAT coding probability 0.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLCD3-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PLCD3-1:7
5.0 lnc-PLCD3-1:7
5.1 lnc-GFAP-17:1
5.2 lnc-PLCD3-4:1