Transcript: lnc-PLCD3-4:4

Basic information

LNCipedia transcript ID: lnc-PLCD3-4:4 
LNCipedia gene ID: lnc-PLCD3-4
Location (hg38): chr17:45149168-45161508
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2167 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224505.2|FTMT26500017924.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 476.3533 coding 
CPAT coding probability 97.74% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PLCD3-4:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PLCD3-1:13
5.0 lnc-PLCD3-1:13
5.1 lnc-GFAP-17:4
5.2 lnc-PLCD3-4:4