Transcript: lnc-PLCD3-4:7

Basic information

LNCipedia transcript ID: lnc-PLCD3-4:7 
LNCipedia gene ID: lnc-PLCD3-4
Location (hg38): chr17:45155577-45161508
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5651 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224505.2|HBMT00000629895.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -26.2723 non-coding 
CPAT coding probability 2.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLCD3-4:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PLCD3-1:11
5.0 lnc-PLCD3-1:11
5.1 lnc-GFAP-17:7
5.2 lnc-PLCD3-4:7