Transcript: lnc-PLCG2-1:18

Basic information

LNCipedia transcript ID: lnc-PLCG2-1:18 
LNCipedia gene ID: lnc-PLCG2-1
Location (hg38): chr16:81739066-81766887
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 678 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000261218.1|ENST00000568131.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -38.815 non-coding 
CPAT coding probability 0.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLCG2-1:18 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PLCG2-1:18
5.0 lnc-PLCG2-1:18
5.1 lnc-CRISPLD2-60:5
5.2 lnc-PLCG2-1:18