Transcript: lnc-PLCG2-9:1

Basic information

LNCipedia transcript ID: lnc-PLCG2-9:1 
LNCipedia gene ID: lnc-PLCG2-9
Ensembl Gene ID: ENSG00000276519
Ensembl Transcript ID: ENST00000614642
Location (hg38): chr16:81987948-81989016
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 354 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000614642.1
Alternative gene names: ENSG00000276519.1; RP11-510J16.6; AC092142.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -195.2236 non-coding 
CPAT coding probability 6.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLCG2-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-PLCG2-9:1
4.1 lnc-PLCG2-9:1
5.0 lnc-PLCG2-9:1
5.1 lnc-CRISPLD2-55:1
5.2 lnc-PLCG2-9:1