Transcript: lnc-PLEKHB2-1:11

Basic information

LNCipedia transcript ID: lnc-PLEKHB2-1:11 
LNCipedia gene ID: lnc-PLEKHB2-1
Location (hg38): chr2:131296843-131309068
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 584 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT074431
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 20.394 non-coding 
CPAT coding probability 31.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLEKHB2-1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CYP4F31P-1:3
4.0 lnc-CYP4F31P-1:3
4.1 lnc-CYP4F31P-1:3
5.0 lnc-CYP4F31P-1:3
5.1 lnc-GPR17-55:3
5.2 lnc-PLEKHB2-1:11