Transcript: lnc-PLEKHB2-1:9

Basic information

LNCipedia transcript ID: lnc-PLEKHB2-1:9 
LNCipedia gene ID: lnc-PLEKHB2-1
RefSeq ID: NR_030728
Location (hg38): chr2:131279290-131299819
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1739 bp
Exons: 6
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT074428; NR_030728; NR_030728.1
Alternative gene names: LOC440910


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 70.1088 coding 
CPAT coding probability 26.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PLEKHB2-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CYP4F31P-1:1
4.0 lnc-CYP4F31P-1:1
4.1 lnc-CYP4F31P-1:1
5.0 lnc-CYP4F31P-1:1
5.1 lnc-GPR17-55:1
5.2 lnc-PLEKHB2-1:9