Transcript: lnc-PLEKHG6-3:4

Basic information

LNCipedia transcript ID: lnc-PLEKHG6-3:4 
LNCipedia gene ID: lnc-PLEKHG6-3
Location (hg38): chr12:6278313-6282900
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1236 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000007803.1|MICT00000072384.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -28.322 non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLEKHG6-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PLEKHG6-3:4
5.0 lnc-PLEKHG6-3:4
5.1 lnc-CLEC4D-81:3
5.2 lnc-PLEKHG6-3:4