Transcript: lnc-PLEKHO1-1:4

Basic information

LNCipedia transcript ID: lnc-PLEKHO1-1:4 
LNCipedia gene ID: lnc-PLEKHO1-1
RefSeq ID: NR_135098
Location (hg38): chr1:150160728-150181228
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 592 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135098.1
Alternative gene names: LOC105371433


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -111.6381 non-coding 
CPAT coding probability 0.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLEKHO1-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-CA14-4:2
5.1 lnc-CA14-4:2
5.2 lnc-PLEKHO1-1:4