Transcript: lnc-PLPP1-1:1

Basic information

LNCipedia transcript ID: lnc-PLPP1-1:1 
LNCipedia gene ID: lnc-PLPP1-1
Location (hg38): chr5:55421526-55423800
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2275 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT101495
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
KTKCPRRR 92.3076923076923% sense-1
Lee translation initiation sites 0 non-coding 
PhyloCSF score -73.3957 non-coding 
CPAT coding probability 1.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PLPP1-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPAP2A-1:1
4.0 lnc-PPAP2A-1:1
4.1 lnc-PPAP2A-1:1
5.0 lnc-PPAP2A-1:1
5.1 lnc-ACTBL2-32:1
5.2 lnc-PLPP1-1:1