Transcript: lnc-PLPP2-1:1

Basic information

LNCipedia transcript ID: lnc-PLPP2-1:1 
LNCipedia gene ID: lnc-PLPP2-1
Ensembl Gene ID: ENSG00000282393
Ensembl Transcript ID: ENST00000632484
Location (hg38): chr19:248551-251571
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3021 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000632484.1
Alternative gene names: ENSG00000282393.1; CTD-3113P16.11; AC016588.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 27.7347 non-coding 
CPAT coding probability 0.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLPP2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-PPAP2C-1:1
4.1 lnc-PPAP2C-1:1
5.0 lnc-PPAP2C-1:1
5.1 lnc-ZNF77-160:1
5.2 lnc-PLPP2-1:1