Transcript: lnc-PLPP3-12:20

Basic information

LNCipedia transcript ID: lnc-PLPP3-12:20 
LNCipedia gene ID: lnc-PLPP3-12
Location (hg38): chr1:56248910-56253764
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 403 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001502; NONHSAT003442
Alternative gene names: XLOC_000844; linc-USP24-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -170.4073 non-coding 
CPAT coding probability 0.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLPP3-12:20 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PPAP2B-2:1
3.1 lnc-PPAP2B-2:2
4.0 lnc-PPAP2B-2:2
4.1 lnc-PPAP2B-2:2
5.0 lnc-PPAP2B-2:2
5.1 lnc-C8B-12:20
5.2 lnc-PLPP3-12:20