Transcript: lnc-PLPP3-12:21

Basic information

LNCipedia transcript ID: lnc-PLPP3-12:21 
LNCipedia gene ID: lnc-PLPP3-12
Location (hg38): chr1:56236272-56249203
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 337 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001501; NONHSAT003438
Alternative gene names: XLOC_000844; linc-USP24-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -115.3719 non-coding 
CPAT coding probability 0.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLPP3-12:21 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PPAP2B-2:2
3.1 lnc-PPAP2B-2:3
4.0 lnc-PPAP2B-2:3
4.1 lnc-PPAP2B-2:3
5.0 lnc-PPAP2B-2:3
5.1 lnc-C8B-12:21
5.2 lnc-PLPP3-12:21