Transcript: lnc-PLPP3-12:22

Basic information

LNCipedia transcript ID: lnc-PLPP3-12:22 
LNCipedia gene ID: lnc-PLPP3-12
Location (hg38): chr1:56248285-56249183
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 899 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT003439
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -144.8072 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLPP3-12:22 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPAP2B-2:5
4.0 lnc-PPAP2B-2:5
4.1 lnc-PPAP2B-2:5
5.0 lnc-PPAP2B-2:5
5.1 lnc-C8B-12:22
5.2 lnc-PLPP3-12:22