Transcript: lnc-PLPP3-12:29

Basic information

LNCipedia transcript ID: lnc-PLPP3-12:29 
LNCipedia gene ID: lnc-PLPP3-12
Ensembl Gene ID: ENSG00000260971
Ensembl Transcript ID: ENST00000641565
Location (hg38): chr1:56165783-56172589
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 411 bp
Exons: 2
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000641565.1
Alternative gene names: ENSG00000260971.4; AC119674.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -75.3887 non-coding 
CPAT coding probability 0.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLPP3-12:29 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-C8B-12:29
5.1 lnc-C8B-12:29
5.2 lnc-PLPP3-12:29