Transcript: lnc-PLXDC1-3:1

Basic information

LNCipedia transcript ID: lnc-PLXDC1-3:1 
LNCipedia gene ID: lnc-PLXDC1-3
Location (hg38): chr17:39008854-39027685
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1082 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT053393
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.0293 non-coding 
CPAT coding probability 2.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLXDC1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FBXO47-3:3
4.0 lnc-PLXDC1-3:1
4.1 lnc-PLXDC1-3:1
5.0 lnc-PLXDC1-3:1
5.1 lnc-SRCIN1-22:2
5.2 lnc-PLXDC1-3:1