Transcript: lnc-PLXDC1-3:2

Basic information

LNCipedia transcript ID: lnc-PLXDC1-3:2 
LNCipedia gene ID: lnc-PLXDC1-3
Location (hg38): chr17:39003635-39027685
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 487 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT053392
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -71.1406 non-coding 
CPAT coding probability 5.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLXDC1-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FBXO47-3:4
4.0 lnc-PLXDC1-3:2
4.1 lnc-PLXDC1-3:2
5.0 lnc-PLXDC1-3:2
5.1 lnc-SRCIN1-22:1
5.2 lnc-PLXDC1-3:2