Transcript: lnc-PMM2-8:1

Basic information

LNCipedia transcript ID: lnc-PMM2-8:1 
LNCipedia gene ID: lnc-PMM2-8
Ensembl Gene ID: ENSG00000260276
Ensembl Transcript ID: ENST00000613908
Location (hg38): chr16:8859813-8860456
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 644 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000613908.1
Alternative gene names: ENSG00000260276.2; RP11-77H9.2; AC022167.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -11.1395 non-coding 
CPAT coding probability 1.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PMM2-8:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-PMM2-2:5
4.1 lnc-PMM2-2:5
5.0 lnc-PMM2-2:5
5.1 lnc-SMIM22-73:1
5.2 lnc-PMM2-8:1