Transcript: lnc-PMP2-1:8

Basic information

LNCipedia transcript ID: lnc-PMP2-1:8 
LNCipedia gene ID: lnc-PMP2-1
Location (hg38): chr8:81279887-81280831
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 727 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000254027.1|ENST00000517670.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 11.1233 non-coding 
CPAT coding probability 5.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PMP2-1:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PMP2-1:8
5.0 lnc-PMP2-1:8
5.1 lnc-CPA6-156:6
5.2 lnc-PMP2-1:8