Transcript: lnc-POLR2F-2:4

Basic information

LNCipedia transcript ID: lnc-POLR2F-2:4 
LNCipedia gene ID: lnc-POLR2F-2
Location (hg38): chr22:37947832-37949119
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1288 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1729:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 14.57 non-coding 
CPAT coding probability 0.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POLR2F-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-POLR2F-2:4
4.1 lnc-POLR2F-2:4
5.0 lnc-POLR2F-2:4
5.1 lnc-APOBEC3H-58:1
5.2 lnc-POLR2F-2:4