Transcript: lnc-POLR3G-3:1

Basic information

LNCipedia transcript ID: lnc-POLR3G-3:1 
LNCipedia gene ID: lnc-POLR3G-3
Ensembl Gene ID: ENSG00000214942
Ensembl Transcript ID: ENST00000505109
Location (hg38): chr5:89900664-89904908
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 584 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00009457; ENST00000505109; ENST00000505109.1; AC113167.1-001; OTTHUMT00000369726.1; NONHSAT102718
Alternative gene names: XLOC_004465; linc-POLR3G-3; ENSG00000214942; AC113167.1; ENSG00000214942.4; OTTHUMG00000162603.1; AC008448.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.1483 non-coding 
CPAT coding probability 0.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POLR3G-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-POLR3G-3:1
3.1 lnc-POLR3G-3:1
4.0 lnc-POLR3G-3:1
4.1 lnc-POLR3G-3:1
5.0 lnc-POLR3G-3:1
5.1 lnc-GPR150-88:1
5.2 lnc-POLR3G-3:1