Transcript: lnc-POLRMT-1:1

Basic information

LNCipedia transcript ID: lnc-POLRMT-1:1 
LNCipedia gene ID: lnc-POLRMT-1
Ensembl Gene ID: ENSG00000261204
Ensembl Transcript ID: ENST00000564240
Location (hg38): chr19:637105-637537
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 433 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000564240.1; AC004449.6-001; OTTHUMT00000430884.1; NONHSAT060152
Alternative gene names: ENSG00000261204.1; AC004449.6; OTTHUMG00000175705.1; AC004449.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 41.4503 non-coding 
CPAT coding probability 3.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-POLRMT-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-POLRMT-1:1
4.0 lnc-POLRMT-1:1
4.1 lnc-POLRMT-1:1
5.0 lnc-POLRMT-1:1
5.1 lnc-ZNF77-146:1
5.2 lnc-POLRMT-1:1