Transcript: lnc-POTEB-3:2

Basic information

LNCipedia transcript ID: lnc-POTEB-3:2 
LNCipedia gene ID: lnc-POTEB-3
Ensembl Gene ID: ENSG00000281113
Ensembl Transcript ID: ENST00000630145
Location (hg38): chr15:21703428-21705627
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 568 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000630145.1
Alternative gene names: ENSG00000281113.1; RP11-294C11.6; AC135068.7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -17.4487 non-coding 
CPAT coding probability 0.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POTEB-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-POTEB-3:2
4.1 lnc-POTEB-3:2
5.0 lnc-POTEB-3:2
5.1 lnc-ATP10A-40:1
5.2 lnc-POTEB-3:2