Transcript: lnc-POTEB3-1:2

Basic information

LNCipedia transcript ID: lnc-POTEB3-1:2 
LNCipedia gene ID: lnc-POTEB3-1
Ensembl Gene ID: ENSG00000247765
Ensembl Transcript ID: ENST00000500487
Location (hg38): chr15:21298233-21325241
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2165 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000500487.2
Alternative gene names: ENSG00000247765.2; RP11-32B5.7; AC068446.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.0973 non-coding 
CPAT coding probability 10.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POTEB3-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-POTEB-1:4
4.1 lnc-POTEB-1:4
5.0 lnc-POTEB-1:4
5.1 lnc-ATP10A-45:2
5.2 lnc-POTEB3-1:2