Transcript: lnc-POTEF-1:3

Basic information

LNCipedia transcript ID: lnc-POTEF-1:3 
LNCipedia gene ID: lnc-POTEF-1
Location (hg38): chr2:129922982-129923972
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 433 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT074248
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 108.9159 coding 
CPAT coding probability 48.42% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-POTEF-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-POTEF-1:3
4.0 lnc-POTEF-1:3
4.1 lnc-POTEF-1:3
5.0 lnc-POTEF-1:3
5.1 lnc-CCDC115-10:3
5.2 lnc-POTEF-1:3