Transcript: lnc-POTEF-8:3

Basic information

LNCipedia transcript ID: lnc-POTEF-8:3 
LNCipedia gene ID: lnc-POTEF-8
Location (hg38): chr2:129978514-129980412
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1899 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT074253
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 91.8827 coding 
CPAT coding probability 54.64% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-POTEF-8:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-POTEF-8:3
4.0 lnc-POTEF-8:3
4.1 lnc-POTEF-8:3
5.0 lnc-POTEF-8:3
5.1 lnc-CCDC115-9:3
5.2 lnc-POTEF-8:3