Transcript: lnc-POTEM-13:2

Basic information

LNCipedia transcript ID: lnc-POTEM-13:2 
LNCipedia gene ID: lnc-POTEM-13
Ensembl Gene ID: ENSG00000257310
Ensembl Transcript ID: ENST00000551932
Location (hg38): chr14:19244962-19247673
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2712 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000551932.1
Alternative gene names: ENSG00000257310.1; RP11-496I2.2; AL589743.1; AL589743.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.8258 non-coding 
CPAT coding probability 0.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POTEM-13:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-POTEG-13:1
4.1 lnc-POTEG-13:1
5.0 lnc-POTEG-13:1
5.1 lnc-OR4K15-26:1
5.2 lnc-POTEM-13:2