Transcript: lnc-POU3F2-6:2

Basic information

LNCipedia transcript ID: lnc-POU3F2-6:2 
LNCipedia gene ID: lnc-POU3F2-6
Location (hg38): chr6:98381893-98505927
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 794 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_3220_chr6:98829768-98953803_brain
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -467.5726 non-coding 
CPAT coding probability 0.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POU3F2-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-POU3F2-6:2
4.0 lnc-POU3F2-6:2
4.1 lnc-POU3F2-6:2
5.0 lnc-POU3F2-6:2
5.1 lnc-PM20D2-66:2
5.2 lnc-POU3F2-6:2