Transcript: lnc-POU3F3-5:3

Basic information

LNCipedia transcript ID: lnc-POU3F3-5:3 
LNCipedia gene ID: lnc-POU3F3-5
Location (hg38): chr2:104406504-104411480
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 572 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227157.1|HBMT00000774083.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -137.1415 non-coding 
CPAT coding probability 2.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POU3F3-5:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-POU3F3-5:3
5.0 lnc-POU3F3-5:3
5.1 lnc-SLC9A4-47:1
5.2 lnc-POU3F3-5:3