Transcript: lnc-POU3F3-7:4

Basic information

LNCipedia transcript ID: lnc-POU3F3-7:4 
LNCipedia gene ID: lnc-POU3F3-7
Ensembl Gene ID: ENSG00000269707
Ensembl Transcript ID: ENST00000598623
Location (hg38): chr2:104853285-104926052
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 443 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT072958; ENST00000598623.1
Alternative gene names: ENSG00000269707.1; RP11-13J10.1; AC018730.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -142.8944 non-coding 
CPAT coding probability 26.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POU3F3-7:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-POU3F3-8:1
4.0 lnc-POU3F3-8:1
4.1 lnc-POU3F3-7:4
5.0 lnc-POU3F3-7:4
5.1 lnc-SLC9A4-61:1
5.2 lnc-POU3F3-7:4