Transcript: lnc-POU4F3-5:2

Basic information

LNCipedia transcript ID: lnc-POU4F3-5:2 
LNCipedia gene ID: lnc-POU4F3-5
Location (hg38): chr5:146461841-146462212
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 372 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr5_9605_+
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -19.0416 non-coding 
CPAT coding probability 1.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POU4F3-5:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-POU4F3-5:2
4.0 lnc-POU4F3-5:2
4.1 lnc-POU4F3-5:2
5.0 lnc-POU4F3-5:2
5.1 lnc-AFAP1L1-36:2
5.2 lnc-POU4F3-5:2