Transcript: lnc-PPARGC1A-4:3

Basic information

LNCipedia transcript ID: lnc-PPARGC1A-4:3 
LNCipedia gene ID: lnc-PPARGC1A-4
Location (hg38): chr4:23831707-23899318
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 359 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT095788
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPARGC1A-4:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DHX15-4:2
4.0 lnc-PPARGC1A-4:3
4.1 lnc-PPARGC1A-4:3
5.0 lnc-PPARGC1A-4:3
5.1 lnc-AFAP1-116:2
5.2 lnc-PPARGC1A-4:3