Transcript: lnc-PPIAL4A-5:3

Basic information

LNCipedia transcript ID: lnc-PPIAL4A-5:3 
LNCipedia gene ID: lnc-PPIAL4A-5
Location (hg38): chr1:120958681-120959126
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 446 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: predAs_chen_AA985444_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.4171 non-coding 
CPAT coding probability 0.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPIAL4A-5:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPIAL4B-5:1
4.0 lnc-PPIAL4B-5:1
4.1 lnc-PPIAL4B-5:1
5.0 lnc-PPIAL4B-5:1
5.1 lnc-PPIAL4A-5:2
5.2 lnc-PPIAL4A-5:3