Transcript: lnc-PPIAL4F-3:1

Basic information

LNCipedia transcript ID: lnc-PPIAL4F-3:1 
LNCipedia gene ID: lnc-PPIAL4F-3
Location (hg38): chr1:143729886-143730755
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 870 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT139902
Alternative gene names: KIAA0493


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.4086 non-coding 
CPAT coding probability 0.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPIAL4F-3:1 no no no no

Available literature

  1. Wang (2015), Multidrug-Resistance Related Long Non-Coding RNA Expression Profile Analysis of Gastric Cancer., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPIAL4C-12:1
4.0 lnc-PPIAL4C-12:1
4.1 LINC00869:50
5.0 LINC00869:50
5.1 lnc-FCGR1A-73:1
5.2 lnc-PPIAL4F-3:1