Transcript: lnc-PPIAL4F-4:5

Basic information

LNCipedia transcript ID: lnc-PPIAL4F-4:5 
LNCipedia gene ID: lnc-PPIAL4F-4
Location (hg38): chr1:143747644-143750565
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 296 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000435115.1; RP11-403I13.4-007; OTTHUMT00000331137.1; NONHSAT006179
Alternative gene names: ENSG00000223779.4; RP11-403I13.4; OTTHUMG00000041572.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -46.1167 non-coding 
CPAT coding probability 1.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPIAL4F-4:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPIAL4C-4:5
4.0 lnc-PPIAL4C-4:5
4.1 lnc-PPIAL4C-4:5
5.0 lnc-PPIAL4C-4:5
5.1 lnc-FCGR1A-72:5
5.2 lnc-PPIAL4F-4:5