Transcript: lnc-PPIE-1:4

Basic information

LNCipedia transcript ID: lnc-PPIE-1:4 
LNCipedia gene ID: lnc-PPIE-1
Location (hg38): chr1:39799441-39806080
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4892 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000261798.1|ENCT00000004560.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 24.2745 non-coding 
CPAT coding probability 17.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPIE-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PPIE-1:4
5.0 lnc-PPIE-1:4
5.1 lnc-PPIE-1:4
5.2 lnc-PPIE-1:4