Transcript: lnc-PPIP5K1-1:2

Basic information

LNCipedia transcript ID: lnc-PPIP5K1-1:2 
LNCipedia gene ID: lnc-PPIP5K1-1
Location (hg38): chr15:43599602-43613187
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2518 bp
Exons: 13
Sources: NONCODE v4
Alternative transcript names: NONHSAT042095
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 645.04 coding 
CPAT coding probability 57.58% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PPIP5K1-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CATSPER2-1:1
4.0 lnc-CATSPER2-1:1
4.1 lnc-CATSPER2-1:1
5.0 lnc-CATSPER2-1:1
5.1 lnc-TP53BP1-8:1
5.2 lnc-PPIP5K1-1:2