Transcript: lnc-PPP1R14B-1:2

Basic information

LNCipedia transcript ID: lnc-PPP1R14B-1:2 
LNCipedia gene ID: lnc-PPP1R14B-1
Location (hg38): chr11:64246975-64252510
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 764 bp
Exons: 4
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1553:3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -130.2621 non-coding 
CPAT coding probability 0.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPP1R14B-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-PPP1R14B-1:2
4.1 lnc-PPP1R14B-1:2
5.0 lnc-PPP1R14B-1:2
5.1 lnc-LTBP3-82:1
5.2 lnc-PPP1R14B-1:2